STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1180Conserved hypothetical protein. (585 aa)    
Predicted Functional Partners:
MMP1179
SAM (and some other nucleotide) binding motif:Generic methyltransferase.
 
    0.985
MMP1181
Iron transport system binding protein.
  
    0.918
MoeA
Molybdopterin biosynthesis moeA protein; Citation: Xiang,S. et al. Structure (Camb) 2001 Apr 4;9(4):299-310.
  
  
 0.735
MMP0546
Protein of unknown function DUF51.
 
     0.694
MMP0802
Iron-containing alcohol dehydrogenase.
  
  
 0.680
nrdD
Anaerobic Ribonucleoside-triphosphate reductase; Eliasson R, Fontecave M, Jornvall H, Krook M, Pontis E, Reichard P. (1990)Proc Natl Acad Sci U S A 87:3314-8; Citation: Science 273 (5278); 1058-1073 (1996).
 
  
 0.614
MMP1387
Protein of unknown function DUF52; Belongs to the MEMO1 family.
     0.578
modA-3
Molybdenum ABC transporter, periplasmic molybdenum-binding protein; Citation: Self WT, et al. Res Mcirobial 2001;152(3-4): 311-21 Reck S, et al. JBC 1996;271(5): 2557-62.
  
    0.469
fdhA
Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol. 185:2548.
  
  
 0.442
MMP1183
Iron ABC transporter ATPase subunit.
  
  
 0.438
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.