Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
MMP1210HTH cro/C1-type domain-containing protein; Unnamed protein product. (229 aa)    
Predicted Functional Partners:
MMP1211
UPF0219 protein MMP1211; Unnamed protein product; Citation: Mol Microbiol. 2000 Aug;37(4):703-16, Genome Res. 2000 Oct;10(10):1468-84; Belongs to the thiolase-like superfamily. UPF0219 family.
  
    0.991
MMP1212
Unnamed protein product.
  
    0.968
MMP1213
Unnamed protein product.
 
    0.961
MMP1064
RNA-binding region RNP-1 (RNA recognition motif):Adenylate cyclase.
 
     0.781
MMP1109
Conserved hypothetical protein.
 
    0.657
cmk
Cytidylate kinase.
  
    0.643
carS
Conserved hypothetical archaeal protein; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
  
    0.643
rpl44e
LSU ribosomal protein L44E; Binds to the 23S rRNA.
  
    0.623
MMP1646
Conserved hypothetical archaeal protein.
  
     0.617
MMP0296
Conserved hypothetical archaeal protein.
  
   
 0.615
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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