STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1259NAD(P)H: rubredoxin oxidoreductase (NPOR). (442 aa)    
Predicted Functional Partners:
MMP0078
Conserved hypothetical protein.
  
 0.936
MMP1135
Flavodoxin:Beta-lactamase-like.
 
  
 0.928
MMP1162
Flavodoxin:Beta-lactamase-like.
    
 0.926
MMP1134
Type A flavoprotein; Citation: Eur. J. Biochem. 1998; 254: 325-332.
 
  
 0.925
fdhA
Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol. 185:2548.
    
 0.921
fdhA-2
Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548.
    
 0.921
rps2
SSU Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
 
 
 0.879
rpsJ
SSU ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
 
 0.878
rpsE
SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy.
  
 
 0.875
rncS
Ribonuclease III family:Double-stranded RNA binding (DsRBD) domain.
  
 
 0.869
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.