STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1260Conserved hypothetical Archael protein. (382 aa)    
Predicted Functional Partners:
MMP1198
Nitrate/sulfonate/bicarbonate ABC transporter ATPase subunit; Citation: Galagan, J.E. et al. Genome Res.12:532-542,2002.
 
  
 0.989
MMP1197
Transport permease protein.
 
  
 0.978
mer
Coenzyme F420-dependent N5,N10-methylenetetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
  
  
 0.713
MMP1261
Conserved hypothetical protein.
  
    0.562
cobA
uroporphyrin-III C-methyltransferase; Citation: J Bacteriol. 1991 Aug;173(15):4637-45; Belongs to the precorrin methyltransferase family.
  
  
 0.541
MMP1234
Conserved hypothetical membrane related protein.
  
  
 0.527
MMP1262
Conserved hypothetical protein.
       0.526
MMP1177
Putative iron transport system substrate-binding protein, C-term half.
 
  
 0.519
MMP0869
Cytidine/deoxycytidylate deaminase, zinc-binding region related protein.
     
 0.507
MMP1263
Conserved hypothetical archaeal protein.
       0.502
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.