Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MMP1278Domain of unknown function DUF190. (109 aa)    
Predicted Functional Partners:
crcB
Camphor resistance CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
 
  
 0.952
MMP1424
Oligosaccharyl transferase, STT3 subunit.
       0.827
frdA
Fumarate reductase/succinate dehydrogenase, flavoprotein subunit.
  
    0.741
cbiE
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
 
    0.702
MMP1606
Flavoprotein:DNA/pantothenate metabolism flavoprotein.
       0.689
MMP1280
Conserved hypothetical protein.
  
    0.471
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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