Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP1283Conserved hypothetical archaeal protein. (67 aa)    
Predicted Functional Partners:
MMP1282
Conseved hypothetical protein NTP-binding; Belongs to the UPF0200 family.
  
    0.942
MMP0903
Hypothetical protein.
   
  
 0.855
MMP0528
Hypothetical protein.
   
  
 0.830
MMP0600
Hypothetical protein.
   
  
 0.800
MMP0709
Hypothetical protein.
   
  
 0.790
MMP0601
Hypothetical protein.
   
  
 0.789
nadE
NAD+ synthase related protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
   
  
 0.662
MMP1685
Conserved hypothetical protein.
   
  
 0.662
MMP0703
Conserved hypothetical protein.
      
 0.634
MMP1173
Conserved membrane protein.
      
 0.630
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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