Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MMP1299 | MMP1300 | MMP1299 | MMP1300 | Carbonic anhydrase. | Hypothetical protein. | 0.990 |
MMP1299 | fdhA-2 | MMP1299 | MMP1298 | Carbonic anhydrase. | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | 0.969 |
MMP1299 | fdhB-2 | MMP1299 | MMP1297 | Carbonic anhydrase. | Formate dehydrogenase beta subunit. | 0.979 |
MMP1299 | fdhC | MMP1299 | MMP1301 | Carbonic anhydrase. | Formate transporter. | 0.993 |
MMP1300 | MMP1299 | MMP1300 | MMP1299 | Hypothetical protein. | Carbonic anhydrase. | 0.990 |
MMP1300 | fdhA-2 | MMP1300 | MMP1298 | Hypothetical protein. | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | 0.955 |
MMP1300 | fdhB-2 | MMP1300 | MMP1297 | Hypothetical protein. | Formate dehydrogenase beta subunit. | 0.949 |
MMP1300 | fdhC | MMP1300 | MMP1301 | Hypothetical protein. | Formate transporter. | 0.997 |
fdhA-2 | MMP1299 | MMP1298 | MMP1299 | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | Carbonic anhydrase. | 0.969 |
fdhA-2 | MMP1300 | MMP1298 | MMP1300 | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | Hypothetical protein. | 0.955 |
fdhA-2 | fdhB | MMP1298 | MMP0139 | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | Formate dehydrogenase beta subunit. | 0.996 |
fdhA-2 | fdhB-2 | MMP1298 | MMP1297 | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | Formate dehydrogenase beta subunit. | 0.999 |
fdhA-2 | fdhC | MMP1298 | MMP1301 | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | Formate transporter. | 0.987 |
fdhA-2 | fmdA | MMP1298 | MMP0509 | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | Formylmethanofuran dehydrogenase, subunit A; Citation: FEBS Lett. 1989 253:226-30; Eur. J. Biochem. 1996 242: 156-162. | 0.949 |
fdhA-2 | fmdB | MMP1298 | MMP0511 | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | Molybdenum containing formylmethanofuran dehydrogenase, subunit B; Contains selenocysteine; Citation: FEBS Lett. 1989 253:226-30; Eur. J. Biochem. 1996 242:156-162. | 0.952 |
fdhA-2 | fmdC | MMP1298 | MMP0510 | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | Molybdenum containing formylmethanofuran dehydrogenase subunit C; Citation: FEBS Lett. 1989 253:226-30; Eur. J. Biochem. 1996 242: 156-162. | 0.951 |
fdhA-2 | fwdB | MMP1298 | MMP1691 | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | Tungsten containing formylmethanofuran dehydrogenase subunit B; Catalyzes the reversible oxidation of CO(2) and methanofuran (MFR) to N-formylmethanofuran (CHO-MFR). This enzyme is oxygen-labile. | 0.953 |
fdhA-2 | fwdC | MMP1298 | MMP1249 | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | Tungsten containing formylmethanofuran dehydrogenase, subunit C; Catalyzes the reversible oxidation of CO(2) and methanofuran (MFR) to N-formylmethanofuran (CHO-MFR). This enzyme is oxygen-labile. Belongs to the FwdC/FmdC family. | 0.949 |
fdhB | fdhA-2 | MMP0139 | MMP1298 | Formate dehydrogenase beta subunit. | Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548. | 0.996 |
fdhB | fdhB-2 | MMP0139 | MMP1297 | Formate dehydrogenase beta subunit. | Formate dehydrogenase beta subunit. | 0.907 |
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