rpsM protein (Methanococcus maripaludis S2) - STRING interaction network

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rpsM

SSU ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. (149 aa)

Predicted Functional Partners:

rps19e

0.999

rps17e

0.999

rps2

0.999

rps6e

0.999

rps4

0.999

rpsK

0.999

rpoD

0.999

rpl18e

0.999

rpl13

0.999

rpsI

0.999

Your Current Organism:

Methanococcus maripaludis S2

NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpl13	rpl18e	MMP1324	MMP1323	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.	0.999
rpl13	rpoD	MMP1324	MMP1322	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	DNA-directed RNA polymerase, subunit D.	0.999
rpl13	rps17e	MMP1324	MMP0577	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S17E; Belongs to the eukaryotic ribosomal protein eS17 family.	0.992
rpl13	rps19e	MMP1324	MMP0156	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S19E (S16A); May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.996
rpl13	rps2	MMP1324	MMP0667	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
rpl13	rps4	MMP1324	MMP1320	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S4P (S9E); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rpl13	rps6e	MMP1324	MMP1207	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.992
rpl13	rpsI	MMP1324	MMP1325	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.999
rpl13	rpsK	MMP1324	MMP1321	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S11; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.	0.999
rpl13	rpsM	MMP1324	MMP1319	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.	0.999
rpl18e	rpl13	MMP1323	MMP1324	LSU Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rpl18e	rpoD	MMP1323	MMP1322	LSU Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.	DNA-directed RNA polymerase, subunit D.	0.998
rpl18e	rps17e	MMP1323	MMP0577	LSU Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.	30S ribosomal protein S17E; Belongs to the eukaryotic ribosomal protein eS17 family.	0.998
rpl18e	rps19e	MMP1323	MMP0156	LSU Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.	Ribosomal protein S19E (S16A); May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.998
rpl18e	rps2	MMP1323	MMP0667	LSU Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.	SSU Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.997
rpl18e	rps4	MMP1323	MMP1320	LSU Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.	SSU ribosomal protein S4P (S9E); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rpl18e	rps6e	MMP1323	MMP1207	LSU Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.	Ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.998
rpl18e	rpsI	MMP1323	MMP1325	LSU Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.999
rpl18e	rpsK	MMP1323	MMP1321	LSU Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.	SSU ribosomal protein S11; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.	0.999
rpl18e	rpsM	MMP1323	MMP1319	LSU Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.	SSU ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.	0.999

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