ehaB protein (Methanococcus maripaludis S2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ehaB

Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43. (163 aa)

Predicted Functional Partners:

ehaE

0.996

ehaF

0.995

ehaD

0.993

ehaC

0.983

ehaA

0.977

MMP1447

0.974

ehaG

0.972

ehaH

0.965

ehaJ

0.959

ehaI

0.956

Your Current Organism:

Methanococcus maripaludis S2

NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MMP1447	ehaA	MMP1447	MMP1448	Cro repressor family Helix-turn-helix motif containing protein.	Conserved hypothetical protein; One of the integral membrane subunits of multisubunit membrane-bound [NiFe]-hydrogenase eha. Eha is predicted to form large electron transfer complex and might catalyze energy-driven reduction of low-potential redox carriers (By similarity).	0.986
MMP1447	ehaB	MMP1447	MMP1449	Cro repressor family Helix-turn-helix motif containing protein.	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.974
MMP1447	ehaC	MMP1447	MMP1450	Cro repressor family Helix-turn-helix motif containing protein.	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.988
MMP1447	ehaD	MMP1447	MMP1451	Cro repressor family Helix-turn-helix motif containing protein.	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.990
MMP1447	ehaE	MMP1447	MMP1452	Cro repressor family Helix-turn-helix motif containing protein.	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.970
MMP1447	ehaF	MMP1447	MMP1453	Cro repressor family Helix-turn-helix motif containing protein.	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.972
MMP1447	ehaG	MMP1447	MMP1454	Cro repressor family Helix-turn-helix motif containing protein.	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 274: 930-43.	0.964
MMP1447	ehaH	MMP1447	MMP1455	Cro repressor family Helix-turn-helix motif containing protein.	Putative transmembrane subunit of a hydrogenase; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.953
MMP1447	ehaI	MMP1447	MMP1456	Cro repressor family Helix-turn-helix motif containing protein.	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.948
MMP1447	ehaJ	MMP1447	MMP1457	Cro repressor family Helix-turn-helix motif containing protein.	Energy conserving hydrogenase A integral membrane subunit; Citation: Tersteegen, A. and R. Hedderich. 1999. Eur. J. Biochem. 264:930-43.	0.947
ehaA	MMP1447	MMP1448	MMP1447	Conserved hypothetical protein; One of the integral membrane subunits of multisubunit membrane-bound [NiFe]-hydrogenase eha. Eha is predicted to form large electron transfer complex and might catalyze energy-driven reduction of low-potential redox carriers (By similarity).	Cro repressor family Helix-turn-helix motif containing protein.	0.986
ehaA	ehaB	MMP1448	MMP1449	Conserved hypothetical protein; One of the integral membrane subunits of multisubunit membrane-bound [NiFe]-hydrogenase eha. Eha is predicted to form large electron transfer complex and might catalyze energy-driven reduction of low-potential redox carriers (By similarity).	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.977
ehaA	ehaC	MMP1448	MMP1450	Conserved hypothetical protein; One of the integral membrane subunits of multisubunit membrane-bound [NiFe]-hydrogenase eha. Eha is predicted to form large electron transfer complex and might catalyze energy-driven reduction of low-potential redox carriers (By similarity).	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.984
ehaA	ehaD	MMP1448	MMP1451	Conserved hypothetical protein; One of the integral membrane subunits of multisubunit membrane-bound [NiFe]-hydrogenase eha. Eha is predicted to form large electron transfer complex and might catalyze energy-driven reduction of low-potential redox carriers (By similarity).	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.983
ehaA	ehaE	MMP1448	MMP1452	Conserved hypothetical protein; One of the integral membrane subunits of multisubunit membrane-bound [NiFe]-hydrogenase eha. Eha is predicted to form large electron transfer complex and might catalyze energy-driven reduction of low-potential redox carriers (By similarity).	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.972
ehaA	ehaF	MMP1448	MMP1453	Conserved hypothetical protein; One of the integral membrane subunits of multisubunit membrane-bound [NiFe]-hydrogenase eha. Eha is predicted to form large electron transfer complex and might catalyze energy-driven reduction of low-potential redox carriers (By similarity).	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.972
ehaA	ehaG	MMP1448	MMP1454	Conserved hypothetical protein; One of the integral membrane subunits of multisubunit membrane-bound [NiFe]-hydrogenase eha. Eha is predicted to form large electron transfer complex and might catalyze energy-driven reduction of low-potential redox carriers (By similarity).	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 274: 930-43.	0.981
ehaA	ehaH	MMP1448	MMP1455	Conserved hypothetical protein; One of the integral membrane subunits of multisubunit membrane-bound [NiFe]-hydrogenase eha. Eha is predicted to form large electron transfer complex and might catalyze energy-driven reduction of low-potential redox carriers (By similarity).	Putative transmembrane subunit of a hydrogenase; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.983
ehaA	ehaI	MMP1448	MMP1456	Conserved hypothetical protein; One of the integral membrane subunits of multisubunit membrane-bound [NiFe]-hydrogenase eha. Eha is predicted to form large electron transfer complex and might catalyze energy-driven reduction of low-potential redox carriers (By similarity).	Conserved hypothetical protein; Citation: Eur. J. Biochem. 1999 264: 930-43.	0.971
ehaA	ehaJ	MMP1448	MMP1457	Conserved hypothetical protein; One of the integral membrane subunits of multisubunit membrane-bound [NiFe]-hydrogenase eha. Eha is predicted to form large electron transfer complex and might catalyze energy-driven reduction of low-potential redox carriers (By similarity).	Energy conserving hydrogenase A integral membrane subunit; Citation: Tersteegen, A. and R. Hedderich. 1999. Eur. J. Biochem. 264:930-43.	0.979