STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1537Cytochrome c heme-binding site. (151 aa)    
Predicted Functional Partners:
MMP1538
Predicted transporter component.
 
    0.998
MMP1539
Conserved hypothetical protein.
 
    0.945
MMP1540
Conserved hypothetical Archael protein.
 
    0.910
MMP1536
Conserved hypothetical archaeal protein.
     
 0.830
MMP1176
Putative iron transport system substrate-binding protein, N-term half.
      
 0.657
MMP1177
Putative iron transport system substrate-binding protein, C-term half.
      
 0.657
cbiA
Cobyrinic acid a,c-diamide synthase.
      
 0.647
cbiA-2
Cobyrinic acid a,c-diamide synthase:Cobyrinic acid a,c-diamide synthase CbiA.
      
 0.647
MMP0707
Na+/H+ exchanger.
  
  
 0.636
modA-4
Possible molybdenum ABC transporter, solute-binding protein.
   
    0.609
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.