STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1538Predicted transporter component. (156 aa)    
Predicted Functional Partners:
MMP1537
Cytochrome c heme-binding site.
 
    0.998
MMP1539
Conserved hypothetical protein.
 
    0.933
MMP0308
Conserved hypothetical archaeal protein.
  
  
 0.894
MMP1540
Conserved hypothetical Archael protein.
 
    0.887
MMP0309
Intracellular sulfur reduction related protein.
 
    0.625
MMP0942
Conserved hypothetical protein.
     
 0.525
MMP1259
NAD(P)H: rubredoxin oxidoreductase (NPOR).
 
   
 0.522
MMP1712
Transcriptional regulator, LysR Family Member.
 
     0.492
MMP0346
2-hydroxyglutaryl-CoA dehydratase (Component D) related protein; Citation: J Mol Biol 2001 Mar 16;307(1):297-308, Appl Microbiol Biotechnol. 2001 Oct;57(3):263-73.
 
    0.484
modA-4
Possible molybdenum ABC transporter, solute-binding protein.
  
    0.465
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.