STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1554Conserved hypothetical archaeal protein. (436 aa)    
Predicted Functional Partners:
mcrA
Methyl-coenzyme M reductase I, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis.
  
 
 0.978
mtrH
N5-methyltetrahydromethanopterin: methyltransferase, subunit H; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. MtrH catalyzes the transfer of the methyl group from methyl-tetrahydromethanopterin to the corrinoid prosthetic group of MtrA.
 
    0.733
MMP0988
RNA methyltransferase related protein; Citation: J Mol Microbiol Biotechnol. 2002 Jan;4(1):71-5.
  
   
 0.702
MMP1314
Phosphoesterase, RecJ-like:RNA binding S1:OB-fold nucleic acid binding domain Related protein.
  
    0.664
MMP0291
Hydrogenase expression/formation protein related.
  
    0.645
cmd
Carboxymuconolactone decarboxylase:Alkylhydroperoxidase AhpD core domain.
  
     0.590
mcrB
Methyl-coenzyme M reductase I, beta subunit; Citation: J. Bacteriol. 1994; 176: 6384-6391. Eur. J. Biochem. 1990; 194: 871-877.
  
    0.567
fwdG
Tungsten containing formylmethanofuran dehydrogenase, subunit G; Citation: FEBS Lett. 1989 253: 226-30; Eur. J. Biocehem. 199642: 156-162.
  
     0.565
fdhB-2
Formate dehydrogenase beta subunit.
  
     0.557
fdhB
Formate dehydrogenase beta subunit.
  
     0.553
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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