Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MMP1603Ferredoxin. (388 aa)    
Predicted Functional Partners:
htpX
Peptidase family M48; Belongs to the peptidase M48B family.
       0.804
MMP1236
Conserved hypothetical protein; Belongs to the UPF0280 family.
 
  
 0.787
MMP1358
Ferredoxin.
 
   
 0.750
MMP0271
ATP binding putative nickel incorporation protein.
 
    0.729
MMP0272
ABC transporter ATPase subunit.
       0.661
MMP0270
Conserved archaeal protein.
       0.660
comE
Sulfopyruvate decarboxylase subunit beta; Involved in the biosynthesis of the coenzyme M (2- mercaptoethanesulfonic acid). Catalyzes the decarboxylation of sulfopyruvate to sulfoacetaldehyde.
       0.655
MMP0491
MotA/TolQ/ExbB proton channel.
 
    0.426
MMP1602
Hypothetical protein.
       0.423
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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