STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1608Conserved hypothetical protein. (102 aa)    
Predicted Functional Partners:
MMP0633
Rubrerythrin.
  
  
 0.895
pyrK
2Fe-2S Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:NADH:cytochrome b5 reductase (CBR); Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
   
 
 0.876
vhuD
F420-non-reducing hydrogenase subunit delta; Contains two selenocysteine residues; Citation: Halboth,S., Klein,A. (1992) Mol. Gen. Genet. 233:217-224; Belongs to the MvhD/VhuD family.
  
   0.843
vhcD
Coenzyme F420-non-reducing hydrogenase subunit delta; Selenium independent; Citation: Berghofer, Y. et al. 1994. Mol. Gen. Genet. 242:369-373. Halboth,S., Klein,A. (1992) Mol. Gen. Genet. 233:217-224.
   
   0.836
MMP0808
Conserved hypothetical protein.
  
   0.798
MMP0208
Conserved hypothetical protein; Contains 4Fe-4S motif.
   
   0.790
MMP0803
Conserved archaeal protein.
   
   0.790
rbo
Desulfoferrodoxin, ferrous iron-binding site.
 
  
 0.741
MMP0559
Family of unknown function ThiJ/PfpI.
  
    0.540
MMP1606
Flavoprotein:DNA/pantothenate metabolism flavoprotein.
  
    0.511
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.