Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP1660Conserved hypothetical archeal protein. (119 aa)    
Predicted Functional Partners:
MMP1661
Hypothetical protein.
  
    0.962
pyrB
Aspartate carbamoyltransferase; Citation: J. Biol Chem 2000 May 26; 275 (21) 15820-7.
 
     0.848
tyrS
Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily.
       0.665
MMP1423
Putative glycosyl transferase, family 4:Aldehyde dehydrogenase.
     
 0.638
MMP0017
Conserved hypothetical protein.
  
     0.611
MMP0002
L-seryl-tRNA selenium transferase related protein.
  
    0.597
MMP1424
Oligosaccharyl transferase, STT3 subunit.
 
     0.558
MMP1471
Conserved hypothetical protein; Belongs to the TmcAL family.
  
    0.555
MMP0028
Cobyric acid synthase related protein.
  
    0.552
MMP0354
Putative oligosaccharide transporter.
 
  
 0.527
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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