Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
flaEFlagella accessory protein E; Citation: J. Bac. 183: 7154-7164. (135 aa)    
Predicted Functional Partners:
flaC
Flagella accessory protein C; Citation: J. Bac. 183: 7154-7164.
  
  
 0.999
flaF
Flagella accessory protein F; Citation: J. Bac. 183: 7154-7164.
  
  
 0.998
flaD
Flagella accessory protein D; Citation: J. Bac. 183: 7154-7164.
  
  
0.997
flaG
Flagella accessory protein G; Citation: J. Bac. 183: 7154-7164.
  
  
 0.994
flaI
Flagella accessory protein I; Citation: J. Bac. 183: 7154-7164.
  
  
 0.994
flaB3
Flagellin B3; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
 0.993
flaB2
Flagellin B2; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
 0.990
flaH
Flagella accessory protein H; Citation: J. Bac. 183: 7154-7164.
  
  
 0.987
flaB1
Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
 0.986
flaJ
Flagella accessory protein J; Citation: J. Bac. 183: 7154-7164.
  
  
 0.982
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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