| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MMP0638 | dnaB | MMP0638 | MMP0380 | Conserved hypothetical protein. | DNA polymerase family B; Citation: J Bact 176:6402-6403 1994. Genes. Genet. Syst. 1998; 73: 323-336. | 0.944 |
| MMP0638 | exoA | MMP0638 | MMP1012 | Conserved hypothetical protein. | Exonuclease III; Citation: J. Bact. (1982) 151: 351-357, PNAS (1986) 83: 7731-7735. | 0.916 |
| MMP0638 | fen-1 | MMP0638 | MMP1313 | Conserved hypothetical protein. | Flap endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Act [...] | 0.979 |
| MMP0638 | nfo | MMP0638 | MMP1678 | Conserved hypothetical protein. | Endonuclease IV; Citation: J. Bio. Chem. (2003) 278: 24563-24576. | 0.902 |
| MMP0638 | nth1 | MMP0638 | MMP0537 | Conserved hypothetical protein. | Endonuclease III homologue; Citation: Nucleic Acids Res. (2001) 29: 604-613. | 0.703 |
| MMP1677 | nfo | MMP1677 | MMP1678 | 4-hydroxybenzoate octaprenyl transferase related protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | Endonuclease IV; Citation: J. Bio. Chem. (2003) 278: 24563-24576. | 0.595 |
| MMP1677 | pyrF | MMP1677 | MMP0602 | 4-hydroxybenzoate octaprenyl transferase related protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.442 |
| dnaB | MMP0638 | MMP0380 | MMP0638 | DNA polymerase family B; Citation: J Bact 176:6402-6403 1994. Genes. Genet. Syst. 1998; 73: 323-336. | Conserved hypothetical protein. | 0.944 |
| dnaB | exoA | MMP0380 | MMP1012 | DNA polymerase family B; Citation: J Bact 176:6402-6403 1994. Genes. Genet. Syst. 1998; 73: 323-336. | Exonuclease III; Citation: J. Bact. (1982) 151: 351-357, PNAS (1986) 83: 7731-7735. | 0.839 |
| dnaB | fen-1 | MMP0380 | MMP1313 | DNA polymerase family B; Citation: J Bact 176:6402-6403 1994. Genes. Genet. Syst. 1998; 73: 323-336. | Flap endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Act [...] | 0.995 |
| dnaB | nfo | MMP0380 | MMP1678 | DNA polymerase family B; Citation: J Bact 176:6402-6403 1994. Genes. Genet. Syst. 1998; 73: 323-336. | Endonuclease IV; Citation: J. Bio. Chem. (2003) 278: 24563-24576. | 0.891 |
| dnaB | nth1 | MMP0380 | MMP0537 | DNA polymerase family B; Citation: J Bact 176:6402-6403 1994. Genes. Genet. Syst. 1998; 73: 323-336. | Endonuclease III homologue; Citation: Nucleic Acids Res. (2001) 29: 604-613. | 0.544 |
| dnaB | uvrA | MMP0380 | MMP0729 | DNA polymerase family B; Citation: J Bact 176:6402-6403 1994. Genes. Genet. Syst. 1998; 73: 323-336. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.527 |
| dnaB | uvrC | MMP0380 | MMP0728 | DNA polymerase family B; Citation: J Bact 176:6402-6403 1994. Genes. Genet. Syst. 1998; 73: 323-336. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.508 |
| exoA | MMP0638 | MMP1012 | MMP0638 | Exonuclease III; Citation: J. Bact. (1982) 151: 351-357, PNAS (1986) 83: 7731-7735. | Conserved hypothetical protein. | 0.916 |
| exoA | dnaB | MMP1012 | MMP0380 | Exonuclease III; Citation: J. Bact. (1982) 151: 351-357, PNAS (1986) 83: 7731-7735. | DNA polymerase family B; Citation: J Bact 176:6402-6403 1994. Genes. Genet. Syst. 1998; 73: 323-336. | 0.839 |
| exoA | fen-1 | MMP1012 | MMP1313 | Exonuclease III; Citation: J. Bact. (1982) 151: 351-357, PNAS (1986) 83: 7731-7735. | Flap endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Act [...] | 0.990 |
| exoA | nfo | MMP1012 | MMP1678 | Exonuclease III; Citation: J. Bact. (1982) 151: 351-357, PNAS (1986) 83: 7731-7735. | Endonuclease IV; Citation: J. Bio. Chem. (2003) 278: 24563-24576. | 0.947 |
| exoA | nth1 | MMP1012 | MMP0537 | Exonuclease III; Citation: J. Bact. (1982) 151: 351-357, PNAS (1986) 83: 7731-7735. | Endonuclease III homologue; Citation: Nucleic Acids Res. (2001) 29: 604-613. | 0.998 |
| exoA | uvrA | MMP1012 | MMP0729 | Exonuclease III; Citation: J. Bact. (1982) 151: 351-357, PNAS (1986) 83: 7731-7735. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.604 |