STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0013Putative esterase of the alpha-beta hydrolase superfamily protein. (297 aa)    
Predicted Functional Partners:
acrR
Putative acrab operon repressor transcription regulator protein.
       0.773
RSc2015
Putative fructose-2,6-bisphosphatase protein.
  
     0.696
RSp0116
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.670
RSc2108
Probable porin signal peptide protein.
  
     0.643
RSc1737
Putative transmembrane outer membrane porin signal peptide protein.
  
     0.616
RSp0051
Probable porin signal peptide protein.
  
     0.593
RSc0686
Putative lipopolysaccharide o-side chain biosynthesis transmembrane protein.
  
     0.569
gor
Probable glutathione reductase oxidoreductase protein.
       0.568
RSc1236
Probable outer membrane protein (porin).
  
     0.536
RSc1082
Probable outer membrane porin protein.
  
     0.531
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.