Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RSc0021Probable transmembrane sensor histidine kinase transcription regulator protein. (487 aa)    
Predicted Functional Partners:
narL
Probable nitrate/nitrite response regulator transcription regulator protein.
   
 0.840
vsrD
Response regulator transcription regulator protein.
   
 0.791
RSc0192
Probable response regulator transcription regulator protein.
 
   
 0.788
RSc2312
Probable two-component response regulator transcription regulator protein.
   
 0.773
RSc3078
Probable response regulator transcription regulator protein.
 
     0.768
RSp0381
Probable transcription regulator protein.
 
     0.765
RSc3388
Probable two-component response regulator transcription regulator protein.
 
     0.762
vsrC
Response regulator vsrc transcription regulator protein.
 
   
 0.757
rcsB
Probable capsular synthesis response regulator transcription regulator protein.
 
     0.757
RSc3161
Probable two component response regulator transcription regulator protein.
 
     0.750
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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