STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0077Probable two component sensor histidine kinase transcription regulator protein. (811 aa)    
Predicted Functional Partners:
RSc0078
Probable two component response regulator transcription regulator protein.
 
 0.996
RSc0076
Probable proline rich signal peptide protein.
 
     0.962
rrmB
Putative rna methyltransferase (sun protein); Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
     
 0.749
RSc1181
Probable cog1807, 4-amino-4-deoxy-l-arabinose transferase and related glycosyltransferases of pmt family transmembrane protein.
  
     0.718
RSc1413
Probable outer membrane chaperone, skp-related transmembrane protein; Belongs to the skp family.
  
     0.667
RSc1116
Hypothetical signal peptide protein.
  
     0.638
RSc1146
Probable transmembrane protein.
  
     0.618
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
  
 
 0.617
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.574
fliF
Probable flagellar m-ring transmembrane protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.562
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.