STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0078Probable two component response regulator transcription regulator protein. (239 aa)    
Predicted Functional Partners:
RSc0077
Probable two component sensor histidine kinase transcription regulator protein.
 
 
 0.943
RSc0076
Probable proline rich signal peptide protein.
 
     0.916
lpxC
UDP-3-O-acyl-N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.
      0.900
RSc0543
Probable response regulator transcription regulator protein.
  
   0.736
RSc1073
Probable two-component system response regulator transcription regulator protein.
  
   0.724
RSp1441
Probable two-component sensor kinase transcription regulator protein.
 
 
 
 0.699
RSc3392
Probable response regulator transcription regulator protein.
  
   0.695
RSc1736
Probable two-component response regulator transcription regulator protein.
  
   0.670
che-3
Putative chemotaxis response regulator transcription regulator protein.
 
 
 0.668
RSc1181
Probable cog1807, 4-amino-4-deoxy-l-arabinose transferase and related glycosyltransferases of pmt family transmembrane protein.
  
     0.665
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.