STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0079Probable transmembrane protein. (795 aa)    
Predicted Functional Partners:
atpE
Probable atp synthase c chain (lipid-binding) transmembrane protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.998
RSc0835
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
    
 0.577
RSc3235
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
    
 0.577
RSc0131
Probable lipoprotein.
    
 
 0.531
RSc3142
Putative transport transmembrane protein.
    
 
 0.531
RSp1005
Probable transmembrane protein.
    
 
 0.531
RSp1228
Putative signal peptide protein.
    
 
 0.531
lepB
Probable signal peptidaseI(spaseI transmembrane protein; Belongs to the peptidase S26 family.
    
  0.446
RSc1716
Putative signal peptidaseI(spaseI protein; Belongs to the peptidase S26 family.
    
  0.446
RSc0080
Probable transmembrane protein.
       0.426
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.