Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RSc0112 | thiC | RSc0112 | RSc0113 | Putative d-amino acid oxidase flavoprotein oxidoreductase. | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.851 |
| RSc0112 | thiD | RSc0112 | RSc0100 | Putative d-amino acid oxidase flavoprotein oxidoreductase. | Probable bifunctional protein: hydroxy-phosphomethylpyrimidine kinase and hydroxy-methylpyrimidine kinase. | 0.412 |
| RSc0112 | thiE1 | RSc0112 | RSc0108 | Putative d-amino acid oxidase flavoprotein oxidoreductase. | Probable thiamine-phosphate pyrophosphorylase protein. | 0.819 |
| RSc0112 | thiG | RSc0112 | RSc0109 | Putative d-amino acid oxidase flavoprotein oxidoreductase. | Thiazole biosynthesis protein thig; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.984 |
| RSc0112 | thiS | RSc0112 | RSc0111 | Putative d-amino acid oxidase flavoprotein oxidoreductase. | Probable sulfur transfer protein this. | 0.858 |
| bioD | thiC | RSc1479 | RSc0113 | Probable dethiobiotin synthetase (dethiobiotin synthase) (dtbsynthetase) (dtbs) protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.566 |
| bioD | thiG | RSc1479 | RSc0109 | Probable dethiobiotin synthetase (dethiobiotin synthase) (dtbsynthetase) (dtbs) protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | Thiazole biosynthesis protein thig; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.791 |
| dxs | thiG | RSc2221 | RSc0109 | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | Thiazole biosynthesis protein thig; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.934 |
| moaD | thiF | RSc1331 | RSc0351 | Probable molybdopterin mpt converting factor (subunit 1) protein. | Putative thif transmembrane protein. | 0.995 |
| moaD | thiG | RSc1331 | RSc0109 | Probable molybdopterin mpt converting factor (subunit 1) protein. | Thiazole biosynthesis protein thig; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.837 |
| thiC | RSc0112 | RSc0113 | RSc0112 | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Putative d-amino acid oxidase flavoprotein oxidoreductase. | 0.851 |
| thiC | bioD | RSc0113 | RSc1479 | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Probable dethiobiotin synthetase (dethiobiotin synthase) (dtbsynthetase) (dtbs) protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.566 |
| thiC | thiD | RSc0113 | RSc0100 | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Probable bifunctional protein: hydroxy-phosphomethylpyrimidine kinase and hydroxy-methylpyrimidine kinase. | 0.999 |
| thiC | thiE1 | RSc0113 | RSc0108 | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Probable thiamine-phosphate pyrophosphorylase protein. | 0.923 |
| thiC | thiE2 | RSc0113 | RSp0984 | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Putative thiamine-phosphate pyrophosphorylase protein. | 0.881 |
| thiC | thiF | RSc0113 | RSc0351 | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Putative thif transmembrane protein. | 0.894 |
| thiC | thiG | RSc0113 | RSc0109 | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Thiazole biosynthesis protein thig; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.996 |
| thiC | thiS | RSc0113 | RSc0111 | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Probable sulfur transfer protein this. | 0.971 |
| thiD | RSc0112 | RSc0100 | RSc0112 | Probable bifunctional protein: hydroxy-phosphomethylpyrimidine kinase and hydroxy-methylpyrimidine kinase. | Putative d-amino acid oxidase flavoprotein oxidoreductase. | 0.412 |
| thiD | thiC | RSc0100 | RSc0113 | Probable bifunctional protein: hydroxy-phosphomethylpyrimidine kinase and hydroxy-methylpyrimidine kinase. | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.999 |
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