STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0122Probable substrate-binding periplasmic (pbp) abc transporter protein. (299 aa)    
Predicted Functional Partners:
gltJ
Probable glutamate/aspartate transmembrane abc transporter protein.
   0.833
gltK
Probable glutamate/aspartate transmembrane abc transporter protein.
 
 
 0.812
gltL
Putative glutamate/aspartate transport atp-binding abc transporter protein.
 
 
 0.792
RSc2258
Probable amino acid transmembrane abc transporter protein.
   0.684
RSp0428
Putative pseudogene protein.
 
 
 0.558
RSc2259
Probable amino acid transmembrane abc transporter protein.
 
 
 0.557
RSc2260
Probable amino-acid atp-binding abc transporter protein.
 
 
 0.542
RSc1743
Miscellaneous; hypothetical/partial homology.
 
 
 0.534
RSp0933
Probable amino acid transmembrane abc transporter protein.
 
 
 0.533
RSp0934
Probable amino acid transmembrane abc transporter protein.
   0.532
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.