STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gstNProbable glutathione s-transferase protein. (202 aa)    
Predicted Functional Partners:
gstI
Probable glutathione-s-transferase protein; Belongs to the GST superfamily.
     
 0.851
gstC
Probable glutathione s-transferase protein.
     
 0.835
gstL
Probable glutathione s-transferase protein.
      
 0.821
gstH
Probable glutathione s-transferase protein.
     
 0.741
gstF
Putative glutathione s-transferase transmembrane protein.
      
 0.545
RSc0128
Probable transcription regulator protein.
       0.527
rcnA
Putative efflux nickel/cobalt transmembrane protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.481
lysS
Putative lysyl-trna synthetase (lysine--trna ligase) (lysrs) protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
  0.478
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.474
rpoC
Probable dna-directed rna polymerase (beta' chain) protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.433
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.