Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RSc0869 | RSc3438 | RSc0869 | RSc3438 | Putative bacteriophage cytosine-specific methyltransferase protein. | Probable site-specific dna methylase protein. | 0.917 |
| RSc0869 | RSp0779 | RSc0869 | RSp0779 | Putative bacteriophage cytosine-specific methyltransferase protein. | Probable autoinducer synthase (acyl homoserine lactone synthase) protein. | 0.904 |
| RSc0869 | metK | RSc0869 | RSc0134 | Putative bacteriophage cytosine-specific methyltransferase protein. | S-adenosylmethionine synthetase (methionineadenosyltransferase) (adomet synthetase) (mat) protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.919 |
| RSc0869 | solI | RSc0869 | RSc3286 | Putative bacteriophage cytosine-specific methyltransferase protein. | Autoinducer synthesis protein soli; Required for the synthesis of acyl-HSL autoinducers that bind to SolR. | 0.901 |
| RSc0869 | speH | RSc0869 | RSp1293 | Putative bacteriophage cytosine-specific methyltransferase protein. | Probable s-adenosylmethionine decarboxylase related transmembrane protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.900 |
| RSc3438 | RSc0869 | RSc3438 | RSc0869 | Probable site-specific dna methylase protein. | Putative bacteriophage cytosine-specific methyltransferase protein. | 0.917 |
| RSc3438 | RSp0779 | RSc3438 | RSp0779 | Probable site-specific dna methylase protein. | Probable autoinducer synthase (acyl homoserine lactone synthase) protein. | 0.904 |
| RSc3438 | metK | RSc3438 | RSc0134 | Probable site-specific dna methylase protein. | S-adenosylmethionine synthetase (methionineadenosyltransferase) (adomet synthetase) (mat) protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.919 |
| RSc3438 | solI | RSc3438 | RSc3286 | Probable site-specific dna methylase protein. | Autoinducer synthesis protein soli; Required for the synthesis of acyl-HSL autoinducers that bind to SolR. | 0.901 |
| RSc3438 | speH | RSc3438 | RSp1293 | Probable site-specific dna methylase protein. | Probable s-adenosylmethionine decarboxylase related transmembrane protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.900 |
| RSp0779 | RSc0869 | RSp0779 | RSc0869 | Probable autoinducer synthase (acyl homoserine lactone synthase) protein. | Putative bacteriophage cytosine-specific methyltransferase protein. | 0.904 |
| RSp0779 | RSc3438 | RSp0779 | RSc3438 | Probable autoinducer synthase (acyl homoserine lactone synthase) protein. | Probable site-specific dna methylase protein. | 0.904 |
| RSp0779 | metK | RSp0779 | RSc0134 | Probable autoinducer synthase (acyl homoserine lactone synthase) protein. | S-adenosylmethionine synthetase (methionineadenosyltransferase) (adomet synthetase) (mat) protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.903 |
| RSp0779 | solI | RSp0779 | RSc3286 | Probable autoinducer synthase (acyl homoserine lactone synthase) protein. | Autoinducer synthesis protein soli; Required for the synthesis of acyl-HSL autoinducers that bind to SolR. | 0.915 |
| RSp0779 | speH | RSp0779 | RSp1293 | Probable autoinducer synthase (acyl homoserine lactone synthase) protein. | Probable s-adenosylmethionine decarboxylase related transmembrane protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.900 |
| metE | metHa | RSp0676 | RSc0295 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | Probable 5-methyltetrahydrofolate--homocysteine methyltransferase (methionine synthase, vitamin-b12 dependent isozyme) protein. | 0.981 |
| metE | metHb | RSp0676 | RSc0294 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.960 |
| metE | metK | RSp0676 | RSc0134 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | S-adenosylmethionine synthetase (methionineadenosyltransferase) (adomet synthetase) (mat) protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.988 |
| metE | tyrB | RSp0676 | RSc1010 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | Probable aromatic-amino-acid aminotransferase protein. | 0.910 |
| metHa | metE | RSc0295 | RSp0676 | Probable 5-methyltetrahydrofolate--homocysteine methyltransferase (methionine synthase, vitamin-b12 dependent isozyme) protein. | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.981 |
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