STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0151Putative transmembrane protein. (309 aa)    
Predicted Functional Partners:
RSc0149
Probable transcription regulator protein.
 
   
 0.865
RSc2325
Probable transcription regulator protein.
 
   
 0.753
RSc0150
Putative nitroreductase; protein.
       0.709
Cog2910
Cog2910, putative nadh-flavin reductase / saccharopine dehydrogenase; oxidoreductase protein.
     0.645
RSc0614
Putative permease transmembrane protein.
  
     0.595
RSp1387
Putative transcription regulator protein.
  
    0.446
RSc0148
Hypothetical/unknown protein; Miscellaneous; unknown.
       0.438
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.