STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0158Probable arginase protein; Belongs to the arginase family. (309 aa)    
Predicted Functional Partners:
RSc0159
Probable acetylornithine aminotransferase protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 0.997
RSp0483
Probable ornithine cyclodeaminase protein.
 
 
 0.941
RSc3352
Putative ornithine cyclodeaminase protein.
 
 
 0.934
RSc2365
Putative orn/lys/arg decarboxylase, c-terminal;chey-like; protein.
   
 0.918
argF
Probable ornithine carbamoyltransferase (otcase) protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
    
 0.915
argJ
Arginine biosynthesis bifunctional protein ArgJ alpha chain; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
     
 0.912
argE
Probable acetylornithine deacetylase (acetylornithinase) protein.
  
 
 0.905
ureA
Probable urease gamma subunit (urea amidohydrolase gamma subunit) protein; Belongs to the urease gamma subunit family.
    
  0.904
ureC
Probable urease (alpha subunit) protein; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
    
  0.903
ureB
Probable urease (beta subunit) protein; Belongs to the urease beta subunit family.
    
  0.903
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.