STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0164Probable atp-binding abc transporter protein. (321 aa)    
Predicted Functional Partners:
RSc0165
Probable abc-type multidrug transport system, permease component abc transporter protein.
  
 0.997
RSc0163
Putative secretion protein hlyd-related protein.
  
 0.965
RSc0166
Probable outer membrane channel lipoprotein.
 
   
 0.806
nosY
Probable nosy transmembrane protein.
 
 
 0.804
nasD
Putative nitrate atp-binding abc transporter protein.
 
    
0.689
RSp0707
Probable amino-acid composite atp-binding transmembrane abc transporter protein.
 
     
0.663
RSc0162
Probable transcription regulator protein.
      0.638
atpD
Probable atp synthase beta chain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.595
atpA
Probable atp synthase alpha chain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
 
 0.570
RSc1806
Probable polyketide synthase protein.
 
 
 0.565
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.