STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0174Probable ketopantoate reductase apba/pane; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (313 aa)    
Predicted Functional Partners:
RSp1244
Putative ketopantoate reductase oxidoreductase protein; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
  
  
 
0.929
RSc3361
Probable ketopantoate reductase oxidoreductase protein.
  
  
 
0.928
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
    
 0.916
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
    
 0.916
RSp0136
Probable nadh:flavin oxidoreductases oxidoreductase protein.
 
      0.558
ttcA
Putative cog0037, predicted atpase of the pp-loop superfamily protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.
       0.533
alkB
Probable alkylated dna repair protein.
   
    0.515
RSc0171
Putative short-chain dehydrogenase/reductase sdr; oxidoreductase protein.
       0.445
RSc0172
Putative fad/fmn-containing dehydrogenase transmembrane protein.
       0.445
RSc0173
Putative prenyltransferase transmembrane protein; Belongs to the UbiA prenyltransferase family.
       0.445
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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