STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0176Probable lipoprotein. (299 aa)    
Predicted Functional Partners:
RSc1259
Putative signal peptide protein.
  
     0.739
RSc2655
Probable transmembrane protein.
  
     0.736
RSc0725
Probable type 4 fimbrial biogenesis pilx-related protein transmembrane.
  
     0.724
addB
Probable homologous recombinational repair protein.
  
     0.709
RSc3360
Hypothetical transmembrane protein.
  
     0.697
repA
Probable repa replicase protein.
  
     0.687
RSc2734
Probable response regulator transcription regulator protein.
 
     0.672
RSc0724
Putative type-4 fimbrial biogenesis pily1-related signal peptide protein.
  
     0.655
addA
Probable homologous recombinational repair protein, atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily.
  
     0.652
pehS
Probable transmembrane sensor histidine kinase transcription regulator protein.
  
     0.647
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.