STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0180Probable pseudogene (alcohol dehydrogenase c-terminal fragment) protein. (85 aa)    
Predicted Functional Partners:
RSc0181
Probable pseudogene (alcohol dehydrogenase n-terminal fragment) protein.
  
 0.983
RSc0179
Probable universal stress protein (usp).
  
    0.577
RSc1546
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
  
 0.454
gbd1
Probable nad-dependent 4-hydroxybutyrate dehydrogenase oxidoreductase protein.
  
 
 0.430
gbd2
Putative nad-dependent 4-hyddoxybutyrate dehydrogenase oxidoreductase protein.
  
 
 0.430
maeB1
Putative nadp-dependent malic enzyme oxidoreductase protein.
  
  
 0.413
maeB2
Putative nadp-dependent malic enzyme oxidoreductase protein.
  
  
 0.413
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.