STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0184Probable osmosensitive k+ channel his kinase sensor;universal stress protein (usp). (166 aa)    
Predicted Functional Partners:
RSp1159
Probable universal stress protein related nucleotide-binding protein.
  
     0.712
RSc0185
Putative universal stress protein uspa and related nucleotide-binding proteins.
     
 0.670
RSc0186
Putative transport-associated; protein.
       0.580
RSc0183
Putative signal-transduction protein containing a cbs domain.
 
  
 0.508
RSc0187
Putative cog0716, flavodoxin protein.
       0.477
RSc0188
Putative zinc finger, dksa/trar c4-type protein.
  
  
 0.421
RSc3271
Putative arsenate reductase oxidoreductase protein.
   
  
 0.414
RSc1391
Probable thioredoxin-related protein; Belongs to the ArsC family.
   
  
 0.408
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.