STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0192Probable response regulator transcription regulator protein. (215 aa)    
Predicted Functional Partners:
RSc0191
Probable transmembrane two component system sensor kinase transcription regulator protein.
 
 0.967
vsrA
Transmembrane sensor kinase vsra transcription regulator protein.
 
 0.842
RSc2311
Putative two-component sensor histidine kinase transcription regulator protein.
 
 0.840
RSc3160
Probable two component sensor histidine kinase transcription regulator protein.
 
 
 0.797
RSc0021
Probable transmembrane sensor histidine kinase transcription regulator protein.
   
 0.775
vsrC
Response regulator vsrc transcription regulator protein.
  
     0.774
epsR
Negative regulator of exopolysaccharide production transcription regulator protein.
  
     0.773
RSc1185
Probable transcription regulator protein.
  
     0.772
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.760
RSp0285
Probable transcription regulator protein.
  
     0.740
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.