STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0206Putative cog1073, hydrolase of the alpha/beta superfamily signal peptide protein. (342 aa)    
Predicted Functional Partners:
RSc0207
Putative transporter transmembrane protein.
 
   
 0.898
RSc0630
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
    0.771
RSc0205
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
 
    0.745
RSc1497
Putative methyltransferase protein.
   
 
 0.580
RSc2084
Putative glycosyl transferase, group 1 protein.
   
 
 0.580
ragF
Probable glycosyl-transfrase protein.
   
 
 0.580
RSp1009
Probable glycosyltransferase protein.
   
 
 0.580
RSp1013
Putative glycosyl transferase, group 1; protein.
   
 
 0.580
RSc0215
Probable dehydrogenase oxidoreductase protein.
  
  
  0.525
fruK
Probable 1-phosphofructokinase protein; Belongs to the carbohydrate kinase PfkB family.
   
    0.501
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.