rtcB protein (Ralstonia solanacearum) - STRING interaction network

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rtcB

Rtcb protein. (406 aa)

Predicted Functional Partners:

rtcA

0.987

rtcR

0.956

RSc0225

0.896

RSc0223

0.784

RSp0699

0.560

rhlE1

0.419

dbpA

0.419

RSc0952

0.419

rhlE2

0.419

RSc0983

0.406

Your Current Organism:

Ralstonia solanacearum

NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RSc0223	RSc0225	RSc0223	RSc0225	Hypothetical/unknown protein; Miscellaneous; unknown.	Putative cog3541, nucleotidyltransferase protein.	0.578
RSc0223	rtcA	RSc0223	RSc0226	Hypothetical/unknown protein; Miscellaneous; unknown.	Probable rna 3'-terminal phosphate cyclase (rna-3'-phosphate cyclase) (rna cyclase) protein; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.	0.496
RSc0223	rtcB	RSc0223	RSc0224	Hypothetical/unknown protein; Miscellaneous; unknown.	Rtcb protein.	0.784
RSc0223	rtcR	RSc0223	RSc0222	Hypothetical/unknown protein; Miscellaneous; unknown.	Probable sigma-54 interacting transcription regulator protein.	0.443
RSc0225	RSc0223	RSc0225	RSc0223	Putative cog3541, nucleotidyltransferase protein.	Hypothetical/unknown protein; Miscellaneous; unknown.	0.578
RSc0225	rtcA	RSc0225	RSc0226	Putative cog3541, nucleotidyltransferase protein.	Probable rna 3'-terminal phosphate cyclase (rna-3'-phosphate cyclase) (rna cyclase) protein; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.	0.937
RSc0225	rtcB	RSc0225	RSc0224	Putative cog3541, nucleotidyltransferase protein.	Rtcb protein.	0.896
RSc0225	rtcR	RSc0225	RSc0222	Putative cog3541, nucleotidyltransferase protein.	Probable sigma-54 interacting transcription regulator protein.	0.805
RSc0952	rtcB	RSc0952	RSc0224	Putative atp-dependent rna helicase protein; Belongs to the DEAD box helicase family.	Rtcb protein.	0.419
RSc0983	rtcB	RSc0983	RSc0224	Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.	Rtcb protein.	0.406
RSp0699	rtcB	RSp0699	RSc0224	Putative peptide chain release factor homolog protein.	Rtcb protein.	0.560
dbpA	rtcB	RSc0622	RSc0224	Probable atp-dependent rna helicase protein; Belongs to the DEAD box helicase family.	Rtcb protein.	0.419
rhlE1	rhlE2	RSc0539	RSc2211	Probable atp-dependent rna helicase protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	Probable atp-dependent rna helicase protein; Belongs to the DEAD box helicase family.	0.907
rhlE1	rtcB	RSc0539	RSc0224	Probable atp-dependent rna helicase protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	Rtcb protein.	0.419
rhlE2	rhlE1	RSc2211	RSc0539	Probable atp-dependent rna helicase protein; Belongs to the DEAD box helicase family.	Probable atp-dependent rna helicase protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.	0.907
rhlE2	rtcB	RSc2211	RSc0224	Probable atp-dependent rna helicase protein; Belongs to the DEAD box helicase family.	Rtcb protein.	0.419
rtcA	RSc0223	RSc0226	RSc0223	Probable rna 3'-terminal phosphate cyclase (rna-3'-phosphate cyclase) (rna cyclase) protein; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.	Hypothetical/unknown protein; Miscellaneous; unknown.	0.496
rtcA	RSc0225	RSc0226	RSc0225	Probable rna 3'-terminal phosphate cyclase (rna-3'-phosphate cyclase) (rna cyclase) protein; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.	Putative cog3541, nucleotidyltransferase protein.	0.937
rtcA	rtcB	RSc0226	RSc0224	Probable rna 3'-terminal phosphate cyclase (rna-3'-phosphate cyclase) (rna cyclase) protein; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.	Rtcb protein.	0.987
rtcA	rtcR	RSc0226	RSc0222	Probable rna 3'-terminal phosphate cyclase (rna-3'-phosphate cyclase) (rna cyclase) protein; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.	Probable sigma-54 interacting transcription regulator protein.	0.960

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