STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0255Probable 2-nitropropane dioxygenase, npd; protein. (327 aa)    
Predicted Functional Partners:
RSc0114
Probable dioxygenase related to 2-nitropropane dioxygenase oxidoreductase protein.
     
 0.950
RSp0307
Probable oxidoreductase protein.
  
  
0.940
narK1
Putative nitrite/nitrate transporter transmembrane protein.
  
 
 0.908
narK2
Probable nitrite/nitrate transporter transmembrane protein.
  
 
 0.908
RSp1223
Probable high affinity nitrate transporter transmembrane protein.
  
 
 0.908
RSp0316
Probable dioxygenase oxidoreductase protein.
  
  
0.903
narI
Probable respiratory nitrate reductase transmembrane protein.
    
  0.901
narG
Probable respiratory nitrate reductase alpha chain oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.900
narH
Probable respiratory nitrate reductase oxidoreductase protein.
    
  0.900
nasA
Probable nitrate reductase large subunit oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
  0.900
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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