STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dehHHypothetical haloacetate dehalogenase h-1 protein. (308 aa)    
Predicted Functional Partners:
RSc1362
Putative dehalogenase-like hydrolase; protein.
 
 
 0.934
RSc2350
Probable aldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.917
betB
Putative betaine aldehyde dehydrogenase (badh) oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
    
 0.904
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.671
RSc0257
Putative type III effector protein with ankyrin repeats.
  
  0.561
RSp1418
Probable hydrolase protein.
  
     0.543
RSc1806
Probable polyketide synthase protein.
 
 0.535
RSp1474
Miscellaneous; hypothetical/partial homology.
  
  0.524
RSc0255
Probable 2-nitropropane dioxygenase, npd; protein.
  
    0.483
RSc1810
Probable polyketide synthase protein.
  
 0.442
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.