STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dehHHypothetical haloacetate dehalogenase h-1 protein. (308 aa)    
Predicted Functional Partners:
RSc1362
Putative dehalogenase-like hydrolase; protein.
 
 
 0.936
RSc2350
Probable aldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
 
  0.914
RSc0161
Probable transmembrane aldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
   
 
  0.900
RSp1591
Probable aldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
   
 
  0.900
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.692
RSp1418
Probable hydrolase protein.
  
     0.543
RSc0257
Putative type III effector protein with ankyrin repeats.
  
 0.529
RSc1806
Probable polyketide synthase protein.
 
 
 0.516
RSc0255
Probable 2-nitropropane dioxygenase, npd; protein.
  
    0.482
RSp1474
Miscellaneous; hypothetical/partial homology.
  
   0.458
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.