STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
RSc0261Putative hydroxymethylglutaryl-coenzyme a lyase active site; protein. (309 aa)    
Predicted Functional Partners:
RSc0267
Putative enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.996
RSc0265
Putative acetyl/propionyl-coa carboxylase, alpha subunit protein.
  
 0.963
lpsI
Probable fesuccinyl-coa:3-ketoacid-coenzyme a transferase subunit a protein.
  
 
 0.935
RSc0269
Putative acetyl-coa carboxylase, carboxyltransferase (subunits alpha and beta) protein.
 
 0.926
lpsJ
Probable succinyl-coa:3-ketoacid-coenzyme a transferase subunit b protein.
  
 
 0.924
RSc0276
Probable acetyl-coa acetyltransferase (acetoacetyl-coa thiolase) protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
RSc0475
Putative acetyl-coa acyltransferase protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
phbA
Probable acetyl-coa acetyltransferase (acetoacetyl-coa thiolase) protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
bktB
Probable beta-ketothiolase protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
RSc1761
Probable acetyl-coa acetyltransferase protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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