STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0268Putative dienelactone hydrolase and related enzymes signal peptide protein. (308 aa)    
Predicted Functional Partners:
RSc0267
Putative enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.773
RSc0269
Putative acetyl-coa carboxylase, carboxyltransferase (subunits alpha and beta) protein.
   
 
 0.746
RSc0055
Signal peptide protein; Putative dienelactone hydrolase and related enzymes / esterase/lipase/thioesterase;lipase, active site; signal peptide protein.
  
     0.727
RSc0271
Putative hydrolase protein.
  
    0.702
RSc0270
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the UPF0225 family.
       0.676
RSc0272
Probable rhodanese-related sulfurtransferase protein.
       0.672
bioB
Probable biotin synthase protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
       0.661
RSc0273
Probable 2-hydroxychromene-2-carboxylate isomerase protein.
       0.611
RSc0559
Putative lipida core-o-antigen ligase transmembrane protein.
  
     0.531
RSc0274
Probable acyl coa dehydrogenase oxidoreductase protein.
  
    0.513
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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