STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
Experiments
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[Homology]
Score
RSc0268Putative dienelactone hydrolase and related enzymes signal peptide protein. (308 aa)    
Predicted Functional Partners:
RSc0267
Putative enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.773
RSc0269
Putative acetyl-coa carboxylase, carboxyltransferase (subunits alpha and beta) protein.
   
 
 0.743
RSc0055
Signal peptide protein; Putative dienelactone hydrolase and related enzymes / esterase/lipase/thioesterase;lipase, active site; signal peptide protein.
  
     0.727
RSc0271
Putative hydrolase protein.
  
    0.708
RSc0270
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the UPF0225 family.
       0.679
RSc0272
Probable rhodanese-related sulfurtransferase protein.
       0.672
bioB
Probable biotin synthase protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
       0.661
RSc0273
Probable 2-hydroxychromene-2-carboxylate isomerase protein.
       0.611
RSc0559
Putative lipida core-o-antigen ligase transmembrane protein.
  
     0.531
RSc0275
Putative short-chain dehydrogenase/reductase sdr oxidoreductase protein.
       0.516
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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