STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0270Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the UPF0225 family. (144 aa)    
Predicted Functional Partners:
RSc0271
Putative hydrolase protein.
       0.786
RSc0272
Probable rhodanese-related sulfurtransferase protein.
  
    0.775
RSc0269
Putative acetyl-coa carboxylase, carboxyltransferase (subunits alpha and beta) protein.
       0.731
RSc0273
Probable 2-hydroxychromene-2-carboxylate isomerase protein.
       0.731
RSc0268
Putative dienelactone hydrolase and related enzymes signal peptide protein.
       0.676
RSc0267
Putative enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.672
RSc0275
Putative short-chain dehydrogenase/reductase sdr oxidoreductase protein.
       0.638
bioB
Probable biotin synthase protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
       0.585
RSc0274
Probable acyl coa dehydrogenase oxidoreductase protein.
       0.580
RSc0276
Probable acetyl-coa acetyltransferase (acetoacetyl-coa thiolase) protein; Belongs to the thiolase-like superfamily. Thiolase family.
       0.574
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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