STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0272Probable rhodanese-related sulfurtransferase protein. (141 aa)    
Predicted Functional Partners:
RSc0271
Putative hydrolase protein.
  
  
 0.780
RSc0270
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the UPF0225 family.
       0.773
RSc0269
Putative acetyl-coa carboxylase, carboxyltransferase (subunits alpha and beta) protein.
       0.725
RSc0273
Probable 2-hydroxychromene-2-carboxylate isomerase protein.
       0.723
RSp0119
Hypothetical of unknown function duf453; transmembrane protein.
 
      0.701
RSp0641
Probable non ribosomal peptide synthetase protein.
   
 
 0.690
RSc0267
Putative enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.675
RSc0268
Putative dienelactone hydrolase and related enzymes signal peptide protein.
       0.672
ispF
Probable cd00554, mecdp synthase (2-c-methyl-d-erythritol-2,4-cyclodiphosphate synthase) protein; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
  
    0.606
bioB
Probable biotin synthase protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
     
 0.596
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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