STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc0281Putative beta-lactamase-like protein. (359 aa)    
Predicted Functional Partners:
RSc0282
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.714
RSc0280
Putative transcription regulator protein.
 
     0.709
RSc1573
Putative hydrolase protein.
  
     0.568
RSp0641
Probable non ribosomal peptide synthetase protein.
   
 
 0.526
RSc2019
Putative phenylacetic acid degradation-related signal peptide protein.
 
    0.473
ncnH
Putative naphthocyclinone hydroxylase transmembrane protein.
 
   0.469
aceK
Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.
     
 0.464
RSc2470
Probable rhs-related protein.
   
    0.460
RSp0085
Putative rhs-related protein.
   
    0.460
RSp0086
Putative rhs-related protein.
   
    0.460
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.