STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0288Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (105 aa)    
Predicted Functional Partners:
RSc0411
Probable transmembrane protein.
  
     0.685
RSc2234
Probable transmembrane protein.
  
     0.605
RSc2005
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.586
rseA
Putative transmembrane sigma-e factor negative regulatory transcription regulator protein.
  
     0.555
argS
Probable arginyl-trna synthetase (arginine--trna ligase) (argrs) protein.
       0.536
RSp1594
Probable porin signal peptide protein.
  
     0.528
RSc1084
Probable outer membrane p2; transmembrane protein.
  
     0.527
RSc0459
Hypothetical transmembrane protein.
  
     0.509
RSc2818
Putative lipoprotein.
  
     0.507
RSc0752
Probable transmembrane protein.
  
     0.497
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.