STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc0305Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (294 aa)    
Predicted Functional Partners:
RSc0306
Putative esterase of the alpha-beta hydrolase superfamily protein.
 
     0.774
phaP1
Probable polyhydroxybutyrate granule-associated protein (phasin) phap1.
  
     0.766
RSc1598
Probable two-component transmembrane sensor histidine kinase transcription regulator protein.
  
     0.756
phaP2
Probable polyhydroxybutyrate granule-associated protein (phasin) phap2.
  
     0.741
RSc0299
Putative prolin-rich signal peptide protein.
 
     0.735
RSc1557
Probable transmembrane protein.
  
     0.725
RSc1259
Putative signal peptide protein.
  
     0.679
RSc2555
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.676
glmU
Probable udp-n-acetylglucosamine pyrophosphorylase protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat [...]
  
    0.672
RSc0304
Probable enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.631
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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