STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0310Putative signal peptide protein. (272 aa)    
Predicted Functional Partners:
ftsA
Probable cell division protein ftsa; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
   
 
 0.823
RSc0317
Probable transmembrane protein.
 
     0.779
RSc1986
Probable type iv pilus assembly fimv-related transmembrane protein.
  
    0.744
pilI
Putative twitching motility protein.
  
   
 0.733
RSc0400
Putative gtpase (dynamin-related) harboring a t-snare domain protein.
  
     0.727
RSc1062
Probable transmembrane protein.
  
     0.715
RSc1259
Putative signal peptide protein.
 
     0.700
birA
Putative bifunctional protein: biotin operon repressor and biotin--[acetyl-coa-carboxylase] synthetase.
       0.671
RSp0971
Probable transmembrane protein.
  
     0.665
coaX
Putative transcription regulation accessory factor transcription regulator protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.
       0.656
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.