STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0315Probable abc-type transport system involved in resistance to organic solvents, periplasmic component abc transporter protein. (330 aa)    
Predicted Functional Partners:
RSc0314
Probable cog1127, abc-type transport system involved in resistance to organic solvents, atpase component abc transporter protein.
 
 0.998
RSc0313
Putative abc-type transport system involved in resistance to organic solvents, permease component abc transporter protein.
 
 0.997
RSc0316
Putative cog3218, abc-type uncharacterized transport system, auxiliary component abc transporter protein.
   0.995
RSc2958
Probable signal peptide protein.
  
 0.970
RSc2961
Putative abc-type transport system involved in resistance to organic solvents, permease component abc transporter protein.
  
 0.964
RSc2962
Probable atp-binding abc transporter protein.
  
 0.959
RSc2957
Hypothetical signal peptide protein.
  
 0.909
RSc2960
Probable signal peptide protein.
     
  0.900
RSc0317
Probable transmembrane protein.
       0.712
RSp1482
Putative outer membrane transmembrane protein.
   
   0.696
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.