STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc0316Putative cog3218, abc-type uncharacterized transport system, auxiliary component abc transporter protein. (211 aa)    
Predicted Functional Partners:
RSc0315
Probable abc-type transport system involved in resistance to organic solvents, periplasmic component abc transporter protein.
   0.982
RSc0313
Putative abc-type transport system involved in resistance to organic solvents, permease component abc transporter protein.
 
  
 0.942
RSc0314
Probable cog1127, abc-type transport system involved in resistance to organic solvents, atpase component abc transporter protein.
 
    0.900
RSc0317
Probable transmembrane protein.
       0.665
RSc2657
Probable transmembrane protein.
  
     0.642
RSc0370
Probable transmembrane protein.
  
     0.624
fliL
Probable flagellar flil transmembrane protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.595
RSc0299
Putative prolin-rich signal peptide protein.
  
     0.570
RSc0411
Probable transmembrane protein.
  
     0.555
RSc3299
Probable transmembrane protein.
 
     0.549
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.