STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc0329Putative ferredoxin 2fe-2s protein. (108 aa)    
Predicted Functional Partners:
nuoE
Probable nadh dehydrogenaseI(chain e) oxidoreductase protein.
 
 
 0.887
RSc2373
Probable formate dehydrogenase (large subunit) oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.868
RSc0328
Putative hydrolase transmembrane protein.
 
     0.776
RSp0682
Putative histamine dehydrogenase oxidoreductase protein.
   
 
 0.775
gltD
Probable glutamate synthase (small subunit) oxidoreductase protein.
   
 
 0.747
nuoM
Probable transmembrane nadh dehydrogenaseI(chain m) oxidoreductase protein.
  
    0.710
nuoG
Probable nadh dehydrogenaseI(chain g) oxidoreductase protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
   
 
 0.608
dac
Probable penicillin-binding (d-alanyl-d-alanine carboxypeptidase) transmembrane protein; Belongs to the peptidase S11 family.
       0.578
RSc0326
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the UPF0250 family.
       0.522
RSc3122
Putative pyruvate:ferredoxin (flavodoxin) oxidoreductase; oxidoreductase protein.
  
  
 0.453
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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