STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctB2Probable c4-dicarboxylate transport sensor kinase transcription regulator protein. (665 aa)    
Predicted Functional Partners:
dctD2
Probable c4-dicarboxylate transport response regulator transcription regulator protein.
 0.990
dctD1
Probable response regulator of the c4-dicarboxylate transport two-component regulatory system transcription regulator protein.
 0.970
dctB1
Probable c4-dicarboxylate transport sensor kinase transcription regulator protein.
  
  
 
0.914
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.701
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
 
0.608
RSp1676
Probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
0.595
dctA1
Probable c4-dicarboxylate transport 1. transmembrane protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
     
 0.555
RSc2936
Putative transmembrane sensor kinase transcription regulator protein.
  
 
   0.530
flgD
Probable basal-body rod modification protein flgd; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.514
vsrB
Composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
 
0.488
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.